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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43017051_43018568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43017051 - 43018568

Intron Length:

1518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTATATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TGTTGTTTGACT

Flanking Amino Acid:

PFSKKNTSLMKVALDTLAAL

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.5

0.46

1.1

65.4

44.6

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

66.1

0.59

1.8

83.64

37.6

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042098

42978002 - 43041225

63224

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987