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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43018663_43020413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43018663 - 43020413

Intron Length:

1751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTAACTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

GTTTGTTTAACT

Flanking Amino Acid:

LQVLRVYSTNSVNAVSLGKN

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

84.7

0.86

74.3

40.7

Major PPT

81.7

0.71

0.9

73.4

41.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

0.8

1.7

88.47

36.7

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987