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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43020996_43021334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43020996 - 43021334

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTAAATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGTGTATTAAAT

Flanking Amino Acid:

LNILIELVSIGGGRRASVLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

69.8

0.45

59.9

45.3

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

55.1

0.24

1.8

74.95

41.3

Associated Gene:

Gene:

AGTPBP1

Ensembl Gene ID:

ENSAPLG00000001395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025918

42992378 - 43041128

48751

ENSAPLT00000022194

42978002 - 43041225

63224

ENSAPLT00000001461

42990778 - 43026764

35987

ENSAPLT00000042098

42978002 - 43041225

63224