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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43056365_43056572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43056365 - 43056572

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTATATTGATA

Flanking Amino Acid:

SFVSPPVLSPKCCLYNNHQA

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.4

0.66

0.8

35.3

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

57.4

0.22

1.6

71.68

33.8

Associated Gene:

Gene:

NAA35

Ensembl Gene ID:

ENSAPLG00000015844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044444

43042334 - 43068060

25727

ENSAPLT00000016584

43042139 - 43067689

25551

ENSAPLT00000048478

43046609 - 43067689

21081

ENSAPLT00000044865

43042334 - 43067689

25356