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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_430797_431141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

430797 - 431141

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATGCTTTAACC

Flanking Amino Acid:

TPLFDTDPPEHLLSAGLPSP

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.4

0.55

0.8

68.5

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

68.9

0.57

1.4

70.96

40.7

Associated Gene:

Gene:

PIGO

Ensembl Gene ID:

ENSAPLG00000016451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030364

427885 - 439016

11132