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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43080416_43082364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43080416 - 43082364

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GTGTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

AGTTCATGACCA

Flanking Amino Acid:

TNLQRKFSYDLSQCINQMKE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

81.7

0.71

0.9

73.6

41.8

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

48.8

-0

65.18

40.5

Associated Gene:

Gene:

GOLM1

Ensembl Gene ID:

ENSAPLG00000016726

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032792

43070414 - 43095166

24753