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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43122932_43125196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43122932 - 43125196

Intron Length:

2265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

CTGTATGTAAAT

Flanking Amino Acid:

GDSDEEVVQDGVRVFIEKKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

73.9

0.54

71.6

38.6

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

45.8

-0.2

2.2

65.51

45.2

Associated Gene:

Gene:

ISCA1

Ensembl Gene ID:

ENSAPLG00000025576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025360

43122783 - 43128182

5400