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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43127175_43128101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43127175 - 43128101

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

CATTTCAGAATG

Flanking Amino Acid:

LQATRAALTLTPSAVQKIKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

29.5

-2.3

33.8

35.1

Minor BPS

47.8

-0.3

1.8

53.95

41.2

Associated Gene:

Gene:

ISCA1

Ensembl Gene ID:

ENSAPLG00000025576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025360

43122783 - 43128182

5400