Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43133105_43133274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43133105 - 43133274

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

CGTTCATCAATA

Flanking Amino Acid:

VAKHGGRLNQGMLIHEEKKK

Intron Amino Acid Position:

1430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

72.1

37.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

75.6

0.58

0.9

69.6

40.7

Minor 5ss

38.3

-1.3

3.5

56.7

47.6

Minor BPS

53.7

0.11

1.8

65.75

40.6

Associated Gene:

Gene:

TUT7

Ensembl Gene ID:

ENSAPLG00000015510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029943

43130785 - 43270976

140192

ENSAPLT00000016201

43132468 - 43270976

138509