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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43139165_43139818_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43139165 - 43139818

Intron Length:
654

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTGAGTAAA

5'SS Class:
strong_major

3'SS Sequence:
ATGTCGTTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TTAAAATTAAAA

Flanking Amino Acid:
VYFFDKIEELPDVWPDFGKN

Intron Amino Acid Position:
1151

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.7
0.84
0.8
81.1
26.8

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
77.4
0.62
1
73.6
41.2

Minor 5ss
29.7
-2.3
2.6
30.1
36.9

Minor BPS
49.3
-0
1.9
65.42
39.6

Associated Gene:

Gene:
TUT7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43130785 - 43270976
140192

43132468 - 43270976
138509