Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43140118_43140206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43140118 - 43140206

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATAACCACAAAA

Flanking Amino Acid:

LCYTMKVFTKMCDIGDASRG

Intron Amino Acid Position:

1087

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

90.2

0.9

0.6

84.6

30.4

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

46.1

-0.2

1.9

59.01

39.4

Associated Gene:

Gene:

TUT7

Ensembl Gene ID:

ENSAPLG00000015510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029943

43130785 - 43270976

140192

ENSAPLT00000016201

43132468 - 43270976

138509