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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43142812_43144064_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43142812 - 43144064

Intron Length:
1253

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATTTGG

5'SS Class:
strong_major

3'SS Sequence:
ACATCTTTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTACAA

U12 Branch Point Sequence:
ACATCTTTTACA

Flanking Amino Acid:
LENFIRLEFPGTKLNLFGSS

Intron Amino Acid Position:
969

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.8
0.8
1
71.6
40.9

Major BPS
64.7
0.37
1
73
31.5

Major PPT
78.9
0.65
0.9
72.4
36.9

Minor 5ss
39.7
-1.2
2.8
50.2
46

Minor BPS
60.7
0.33
1.6
66.11
40.6

Associated Gene:

Gene:
TUT7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43130785 - 43270976
140192

43132468 - 43270976
138509