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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43144936_43145060_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43144936 - 43145060

Intron Length:
125

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGCAAG

5'SS Class:
strong_major

3'SS Sequence:
TCTGTTCATGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TACTTTTTAAAA

Flanking Amino Acid:
FSKTAFTKGKSPTVVCSLCK

Intron Amino Acid Position:
890

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.6
0.93
0.9
77.9
38.6

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
78.8
0.65
0.9
73.7
35.9

Minor 5ss
38.7
-1.3
2.8
47.8
47.9

Minor BPS
65
0.47
1.3
69.01
37.3

Associated Gene:

Gene:
TUT7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43130785 - 43270976
140192

43132468 - 43270976
138509