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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43146188_43146591_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43146188 - 43146591

Intron Length:
404

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTTAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTCTGTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAT

U12 Branch Point Sequence:
TGCTGATTAACT

Flanking Amino Acid:
DWPKKRIAVEDPYSVKRNVA

Intron Amino Acid Position:
514

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.9
0.94
0.8
85.7
25.6

Major BPS
76.2
0.65
1.1
65.3
43.7

Major PPT
79.3
0.66
0.9
81.2
30.9

Minor 5ss
48
-0.2
2.5
66.4
45.1

Minor BPS
58.1
0.33
2.1
77.89
44.1

Associated Gene:

Gene:
TUT7

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43130785 - 43270976
140192

43132468 - 43270976
138509