Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43151800_43154616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43151800 - 43154616

Intron Length:

2817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

LLVQESLQNSESFIEVDADF

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.6

0.69

0.7

74.2

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

TUT7

Ensembl Gene ID:

ENSAPLG00000015510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029943

43130785 - 43270976

140192

ENSAPLT00000016201

43132468 - 43270976

138509