Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43159529_43162533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43159529 - 43162533

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATCAAC

5'SS Class:

major

3'SS Sequence:

AACTCTTTCTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ACTCTCATAACT

Flanking Amino Acid:

DVPEMQKGNPEMKKLKKTRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

66.9

38.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

64.3

0.32

1.1

67.7

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

61.1

0.43

1.6

76.59

39.6

Associated Gene:

Gene:

TUT7

Ensembl Gene ID:

ENSAPLG00000015510

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029943

43130785 - 43270976

140192

ENSAPLT00000016201

43132468 - 43270976

138509