Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_4337710_4337798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4337710 - 4337798

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

ACTCTTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTACTCTTCATT

Flanking Amino Acid:

LDGRTFYIDHRSQVLICGDI

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.4

37.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

72.5

0.51

0.9

70.7

34.5

Minor 5ss

36.9

-1.5

2.7

44.1

38.5

Minor BPS

59.5

0.38

1.7

77.74

38.9

Associated Gene:

Gene:

NEDD4L

Ensembl Gene ID:

ENSAPLG00000008925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044498

4320290 - 4383793

63504

ENSAPLT00000040353

4320290 - 4457497

137208

ENSAPLT00000009384

4320290 - 4457497

137208