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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43415931_43416415_R

Intron Information:

Intron Rank:

135245

Intron Class:

major

Intron Phase:

Intron Coordinates:

43415931 - 43416415

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCACATTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCACTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.6

0.67

0.9

76.6

36.9

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

59.9

0.39

1.4

70.96

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047725

43410663 - 43416538

5876