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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43629854_43630004_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
43629854 - 43630004

Intron Length:
151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTGAGTCGT

5'SS Class:
strong_major

3'SS Sequence:
TTTCCTATTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
ACTACCTGAAAC

Flanking Amino Acid:
FIRRLLVKDPKKRMTIQDSL

Intron Amino Acid Position:
107

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
0.9
71.6
40.2

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
74.9
0.56
1
75.5
31.9

Minor 5ss
32.2
-2
3
41.5
39

Minor BPS
56.2
0.17
1.6
64.24
40.5

Associated Gene:

Gene:
DAPK1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43612791 - 43663639
50849

43626125 - 43663639
37515