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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43631730_43632953_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43631730 - 43632953

Intron Length:
1224

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTCAT

5'SS Class:
strong_major

3'SS Sequence:
TATTTTTAAAAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATG

Flanking Amino Acid:
KRFAARRKWKQSVRLISLCQ

Intron Amino Acid Position:
153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.9
0.85
0.9
80.7
33.7

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
65.6
0.35
1.2
69
39.9

Minor 5ss
37.6
-1.4
3
50.5
40

Minor BPS
78
0.74
1.1
78.3
32.8

Associated Gene:

Gene:
DAPK1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43612791 - 43663639
50849

43610193 - 43660594
50402

43626125 - 43663639
37515