Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43641535_43642626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43641535 - 43642626

Intron Length:

1092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TCTCACATACAA

Flanking Amino Acid:

HGADLDATDKDGHIALHLAV

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.1

35.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

74.5

0.55

69.9

40.2

Minor 5ss

35.9

-1.6

2.6

40.9

45.4

Minor BPS

42.8

-0.5

56.29

42.1

Associated Gene:

Gene:

DAPK1

Ensembl Gene ID:

ENSAPLG00000014607

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034419

43612791 - 43663639

50849

ENSAPLT00000017226

43610193 - 43660594

50402

ENSAPLT00000015325

43626125 - 43663639

37515