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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43715837_43717015_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43715837 - 43717015

Intron Length:
1179

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTACGGTTG

5'SS Class:
major

3'SS Sequence:
TGCTCTTCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATAAC

U12 Branch Point Sequence:
CTGCTAATAACT

Flanking Amino Acid:
QGVDCFMLDPGLGEFILVDR

Intron Amino Acid Position:
159

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
61.9
45.1

Major BPS
70.1
0.5
1
70.3
31.9

Major PPT
82.2
0.72
0.8
76.8
31.9

Minor 5ss
39.8
-1.1
3.5
55.5
48.7

Minor BPS
47.9
-0
1.9
67.19
43.2

Associated Gene:

Gene:
FBP2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43706351 - 43727798
21448

43706351 - 43725749
19399