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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43735099_43736107_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
43735099 - 43736107

Intron Length:
1009

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAACCCA

5'SS Class:
major

3'SS Sequence:
TTTTATCCTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TGATTTTTATCC

Flanking Amino Acid:
PANSKSPKGKLRLLYECNPM

Intron Amino Acid Position:
187

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.66
1
64.9
41.1

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
87
0.83
0.7
81.2
30.6

Minor 5ss
37.5
-1.4
3.1
48.7
47

Minor BPS
59.7
0.28
1.6
67.32
38.3

Associated Gene:

Gene:
FBP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43734907 - 43744602
9696