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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_43993220_43997240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43993220 - 43997240

Intron Length:

4021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCATATTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

AAATACTTAATT

Flanking Amino Acid:

VKALVEDTNISSSDLLEVWF

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

76.2

0.59

66.5

43.6

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

68.7

0.66

1.4

78.05

37.6

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040951

43988026 - 44055958

67933

ENSAPLT00000014118

43988026 - 44060060

72035