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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44002990_44005135_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44002990 - 44005135

Intron Length:

2146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTGTCATAATC

Flanking Amino Acid:

AIFRIVNEIFKNALLETDGT

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.47

70.3

40.3

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

55.4

0.15

1.7

66.2

40.2

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040951

43988026 - 44055958

67933

ENSAPLT00000014118

43988026 - 44060060

72035