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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44005189_44010112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44005189 - 44010112

Intron Length:

4924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACGAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTCCTTTCATT

Flanking Amino Acid:

VASVIKDSFLPQAASHPAIF

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

70.5

0.46

66.5

38.6

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

66.2

0.59

1.7

84.98

35.9

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040951

43988026 - 44055958

67933

ENSAPLT00000014118

43988026 - 44060060

72035