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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44013843_44016574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44013843 - 44016574

Intron Length:

2732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTCTGTATTT

Flanking Amino Acid:

NQFNGLTVQGSVPASRVNAV

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

86.1

0.81

0.7

85.2

29.2

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

56.4

0.28

2.2

83.14

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040951

43988026 - 44055958

67933

ENSAPLT00000014118

43988026 - 44060060

72035