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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44017533_44048005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44017533 - 44048005

Intron Length:

30473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TAATTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTCTGTTAATT

Flanking Amino Acid:

VELKANSWIRSLLCHLLSSS

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

84.4

0.85

34.5

Major PPT

77.4

0.62

0.9

70.9

35.4

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

56.4

0.28

2.1

76.4

40.9

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014118

43988026 - 44060060

72035

ENSAPLT00000040951

43988026 - 44055958

67933