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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44048101_44053775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44048101 - 44053775

Intron Length:

5675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

GTATCCTTATTT

Flanking Amino Acid:

LCWNPFVIGYDESQKTLMWC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

74.3

34.1

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.92

0.6

85.6

29.2

Minor 5ss

34.9

-1.7

2.9

42.4

38.2

Minor BPS

69.8

0.7

1.6

81.82

39.7

Associated Gene:

Gene:

FANCC

Ensembl Gene ID:

ENSAPLG00000013504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040951

43988026 - 44055958

67933

ENSAPLT00000014118

43988026 - 44060060

72035