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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44097907_44100885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44097907 - 44100885

Intron Length:

2979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

AACCTCACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

AATCCCTGAAAC

Flanking Amino Acid:

LAGSEFDFIVRYFFAVLAIL

Intron Amino Acid Position:

1126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

63.6

0.34

65.3

32.1

Major PPT

68.5

0.42

0.9

63.6

37.1

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

58.5

0.25

1.6

66.71

37.5

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093