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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44103947_44105464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44103947 - 44105464

Intron Length:

1518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

TGAAATCATCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

GCTCTTTGAAAT

Flanking Amino Acid:

LLNPWTAGIIVVVLALMTVE

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

78.8

30.7

Major BPS

71.6

0.54

33.1

Major PPT

58.1

0.18

48.4

44.6

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.2

0.02

1.5

63.94

40.1

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093