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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44109584_44115197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44109584 - 44115197

Intron Length:

5614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTAACTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ACTTTCTTAACT

Flanking Amino Acid:

WLHYFRDWLQGLQDAFDSDW

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

82.2

0.8

71.9

35.8

Major PPT

77.9

0.63

0.9

73.8

36.4

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

83.5

1.13

89.83

34.4

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093