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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44115508_44115988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44115508 - 44115988

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCAGA

5'SS Class:

major

3'SS Sequence:

TCTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AAAAACCTAACA

Flanking Amino Acid:

APFLLKPKAKIVVIFLFLGL

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

68.9

43.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

44.3

-0.6

2.7

58.2

Minor BPS

48.2

-0.1

1.9

59.41

38.9

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093