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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44124679_44125840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44124679 - 44125840

Intron Length:

1162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGACA

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

ATTCACATGACT

Flanking Amino Acid:

TGQNKRIPFEDRTGECLKRT

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.3

40.2

Major BPS

82.3

0.8

83.6

25.8

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

31.5

-2.1

3.2

41.3

44.7

Minor BPS

54.4

0.22

1.8

77.75

37.7

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093