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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44125940_44126531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44125940 - 44126531

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAGG

5'SS Class:

major

3'SS Sequence:

TTTCTCCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAACAA

U12 Branch Point Sequence:

TTCTCCCCCAAG

Flanking Amino Acid:

GISFNAATTQVLPFLALGVG

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

67.2

43.7

Major BPS

44.6

-0.3

1.1

47.3

36.1

Major PPT

70.2

0.45

68.6

32.2

Minor 5ss

41.3

-1

2.5

51.6

44.8

Minor BPS

-0.7

2.3

53.67

46.6

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093