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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44126688_44126995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44126688 - 44126995

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATAAAA

5'SS Class:

major

3'SS Sequence:

CCCTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTCCCATACCC

Flanking Amino Acid:

IRVASGYLLMLAYACLTMLR

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

71.5

33.2

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

82.9

0.74

0.7

80.1

25.3

Minor 5ss

-1.9

2.9

37.4

41.2

Minor BPS

59.7

0.28

1.9

77.33

38.3

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013331

44094568 - 44155660

61093

ENSAPLT00000023798

44096344 - 44155709

59366