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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44132024_44132152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44132024 - 44132152

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTGGTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTGTTTTTACCC

Flanking Amino Acid:

LITEAGYMDQIIEYLYPCLI

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

79.7

35.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

71.8

0.49

1.1

67.9

42.5

Minor 5ss

-0.1

2.5

65.8

45.4

Minor BPS

58.4

0.24

1.6

65.93

40.3

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093