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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44133680_44154403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44133680 - 44154403

Intron Length:

20724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCATCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTCCCATCA

Flanking Amino Acid:

ETNVEELWVEVGGRVSRELN

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

67.8

43.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

83.4

0.75

0.8

83.3

26.9

Minor 5ss

31.1

-2.2

3.3

41.9

44.9

Minor BPS

49.2

-0

2.1

72.11

39.8

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023798

44096344 - 44155709

59366

ENSAPLT00000013331

44094568 - 44155660

61093