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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44154597_44155528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44154597 - 44155528

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCTTCCC

5'SS Class:

major

3'SS Sequence:

TGTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

ACCGACTGACCT

Flanking Amino Acid:

AAFALEQIAKGRATGRKAPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

58.8

40.3

Major BPS

55.9

0.15

1.2

Major PPT

80.6

0.69

0.9

73.7

36.9

Minor 5ss

-2.4

2.9

40.1

Minor BPS

43.1

-0.4

1.9

55.68

46.2

Associated Gene:

Gene:

PTCH1

Ensembl Gene ID:

ENSAPLG00000012739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013331

44094568 - 44155660

61093