Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44328312_44329283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44328312 - 44329283

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CACTTCTGAAAT

Flanking Amino Acid:

MMYLRQVYKQQLHCAVVGSE

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

79.2

0.66

0.9

77.4

36.9

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

54.1

0.21

1.6

66.83

43.6

Associated Gene:

Gene:

ERCC6L2

Ensembl Gene ID:

ENSAPLG00000006105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023532

44295694 - 44349580

53887

ENSAPLT00000006348

44295694 - 44348748

53055