Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44329437_44330347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44329437 - 44330347

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGAAGT

5'SS Class:

major

3'SS Sequence:

TTTGAATCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TATTTTTGAATC

Flanking Amino Acid:

GSCLTKEILEREGRVEAGVM

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

73.3

37.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

74.5

0.55

0.9

71.3

39.5

Minor 5ss

35.8

-1.6

46.8

Minor BPS

64.9

0.45

1.3

71.78

33.1

Associated Gene:

Gene:

ERCC6L2

Ensembl Gene ID:

ENSAPLG00000006105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023532

44295694 - 44349580

53887

ENSAPLT00000006348

44295694 - 44348748

53055