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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44347116_44347856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44347116 - 44347856

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATT

Flanking Amino Acid:

LVGKTPKEIRRRQFEEMVSH

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.7

0.67

0.9

73.4

40.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

70.3

0.72

1.1

81.54

34.7

Associated Gene:

Gene:

ERCC6L2

Ensembl Gene ID:

ENSAPLG00000006105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006439

44295694 - 44348838

53145

ENSAPLT00000006348

44295694 - 44348748

53055

ENSAPLT00000023532

44295694 - 44349580

53887