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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44437422_44439795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44437422 - 44439795

Intron Length:

2374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TAATTCTTAACA

Flanking Amino Acid:

VNCNIISATKMTQIILKQME

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.67

0.9

72.7

Minor 5ss

-1.1

53.2

44.1

Minor BPS

80.7

0.96

81.39

33.2

Associated Gene:

Gene:

HSD17B3

Ensembl Gene ID:

ENSAPLG00000006227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026817

44433280 - 44456181

22902

ENSAPLT00000006445

44432903 - 44456181

23279