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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44439832_44440965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44439832 - 44440965

Intron Length:

1134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTATCTACAAAC

Flanking Amino Acid:

RFLNAPDIDENLVNCNIISA

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

75.1

0.62

65.6

Major PPT

82.2

0.72

0.8

78.3

30.6

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

49.2

-0

1.9

66.18

38.7

Associated Gene:

Gene:

HSD17B3

Ensembl Gene ID:

ENSAPLG00000006227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006445

44432903 - 44456181

23279

ENSAPLT00000026817

44433280 - 44456181

22902