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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44441034_44441756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44441034 - 44441756

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTCCTTTGATT

Flanking Amino Acid:

GLQGLEIGVLVNNVGMLHNP

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.4

38.7

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

71.9

0.49

0.9

73.9

35.5

Minor 5ss

28.6

-2.5

2.7

27.3

36.3

Minor BPS

0.9

1.1

88.36

29.9

Associated Gene:

Gene:

HSD17B3

Ensembl Gene ID:

ENSAPLG00000006227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026817

44433280 - 44456181

22902

ENSAPLT00000006445

44432903 - 44456181

23279