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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44453891_44455997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44453891 - 44455997

Intron Length:

2107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

TTACTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTCTTTTTACTT

Flanking Amino Acid:

AFFPSLGEWAVVTGAGDGLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

0.72

78.4

31.2

Major PPT

82.1

0.72

0.8

74.1

36.5

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

63.3

0.49

1.6

78.3

39.3

Associated Gene:

Gene:

HSD17B3

Ensembl Gene ID:

ENSAPLG00000006227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026817

44433280 - 44456181

22902

ENSAPLT00000006445

44432903 - 44456181

23279