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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44484672_44485069_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
44484672 - 44485069
Intron Length:
398

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTGAGCCAG
5'SS Class:
major
3'SS Sequence:
TTCTGTTTTTAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTTTCAT
U12 Branch Point Sequence:
GTGTCTTTCATT
Flanking Amino Acid:
GEKPFICSENGCLSRFTHAN
Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.7
0.58
1
57.6
43
Major BPS
87.6
0.93
0.9
89.3
26
Major PPT
78
0.63
1
82.5
32.9
Minor 5ss
31.9
-2.1
3
35.3
42.3
Minor BPS
61.1
0.43
1.7
76
41.5

Associated Gene:

Gene:
ZNF367
Ensembl Gene ID:
ENSAPLG00000025910
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026540
44482521 - 44487412
4892