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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44507455_44509503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44507455 - 44509503

Intron Length:

2049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTGTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTCTGTTTACT

Flanking Amino Acid:

EFERQSGNDKTEVEQTAPVE

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

1.2

85.2

32.2

Major BPS

71.4

0.53

1.1

63.4

Major PPT

79.3

0.66

0.9

77.5

36.7

Minor 5ss

-1.1

3.4

57.4

40.7

Minor BPS

52.4

0.15

2.3

81.17

40.3

Associated Gene:

Gene:

HABP4

Ensembl Gene ID:

ENSAPLG00000008194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044843

44497953 - 44519627

21675