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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44509588_44516405_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44509588 - 44516405

Intron Length:

6818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATAGTCT

5'SS Class:

weak_major

3'SS Sequence:

TATAAACCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTTACG

Flanking Amino Acid:

QGTTEGEPLKKVAEGEPIEE

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

61.8

37.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

65.6

0.35

60.7

40.9

Minor 5ss

46.5

-0.4

3.2

64.6

41.3

Minor BPS

66.6

0.38

1.9

77.02

39.9

Associated Gene:

Gene:

HABP4

Ensembl Gene ID:

ENSAPLG00000008194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044843

44497953 - 44519627

21675

ENSAPLT00000008515

44497953 - 44519627

21675