Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_44533267_44539637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

44533267 - 44539637

Intron Length:

6371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

CTACCCTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTTCCTACCC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.6

37.3

Major BPS

0.72

78.4

31.2

Major PPT

79.9

0.67

0.8

76.7

31.6

Minor 5ss

39.2

-1.2

3.4

53.4

43.8

Minor BPS

60.7

0.31

78.54

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038324

44533217 - 44572333

39117